Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
APOEP02649 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOEP02649 MIR105-1-201ENST00000385222 81 ntBASIC5.57□□□□□ -1.52
APOEP02649 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.57□□□□□ -1.52
APOEP02649 HYALP1-201ENST00000417674 1279 ntBASIC5.57□□□□□ -1.52
APOEP02649 SLC35E1P1-201ENST00000419313 864 ntBASIC5.57□□□□□ -1.52
APOEP02649 TRGV5P-201ENST00000419915 354 ntBASIC5.57□□□□□ -1.52
APOEP02649 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOEP02649 AL355433.1-201ENST00000422804 300 ntBASIC5.57□□□□□ -1.52
APOEP02649 RPS26P41-201ENST00000450370 284 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.57□□□□□ -1.52
APOEP02649 COPS8P2-201ENST00000473228 627 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC074386.1-201ENST00000476560 767 ntBASIC5.57□□□□□ -1.52
APOEP02649 RPL5P22-201ENST00000480199 884 ntBASIC5.57□□□□□ -1.52
APOEP02649 RPL7P40-201ENST00000481703 745 ntBASIC5.57□□□□□ -1.52
APOEP02649 OR11I1P-201ENST00000486033 954 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.57□□□□□ -1.52
APOEP02649 OR8G3P-201ENST00000533406 921 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC090022.1-201ENST00000546569 311 ntBASIC5.57□□□□□ -1.52
APOEP02649 OR11H3P-201ENST00000554547 982 ntBASIC5.57□□□□□ -1.52
APOEP02649 RPL10P14-201ENST00000565265 298 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.57□□□□□ -1.52
APOEP02649 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.57□□□□□ -1.52
APOEP02649 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
APOEP02649 AP005262.1-201ENST00000582646 997 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.57□□□□□ -1.52
APOEP02649 AL512329.2-201ENST00000607350 548 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC135068.5-201ENST00000624197 983 ntBASIC5.57□□□□□ -1.52
APOEP02649 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.57□□□□□ -1.52
APOEP02649 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
APOEP02649 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
APOEP02649 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOEP02649 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.57□□□□□ -1.52
APOEP02649 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOEP02649 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
APOEP02649 TCP1P3-201ENST00000414406 1498 ntBASIC5.57□□□□□ -1.52
APOEP02649 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
APOEP02649 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
APOEP02649 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
APOEP02649 AC104260.2-201ENST00000623551 3497 ntBASIC5.56□□□□□ -1.52
APOEP02649 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.56□□□□□ -1.52
APOEP02649 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
APOEP02649 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
APOEP02649 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.56□□□□□ -1.52
APOEP02649 RNA5SP296-201ENST00000410523 111 ntBASIC5.56□□□□□ -1.52
APOEP02649 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.56□□□□□ -1.52
APOEP02649 AL445213.1-201ENST00000412589 747 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.56□□□□□ -1.52
APOEP02649 OR6C64P-201ENST00000419708 825 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.56□□□□□ -1.52
APOEP02649 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.56□□□□□ -1.52
APOEP02649 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.56□□□□□ -1.52
APOEP02649 RPS4XP1-201ENST00000482189 787 ntBASIC5.56□□□□□ -1.52
APOEP02649 RN7SL423P-201ENST00000486202 304 ntBASIC5.56□□□□□ -1.52
APOEP02649 RN7SL30P-201ENST00000488416 306 ntBASIC5.56□□□□□ -1.52
APOEP02649 RN7SL629P-201ENST00000489622 285 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC024558.1-201ENST00000505008 528 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.56□□□□□ -1.52
APOEP02649 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.56□□□□□ -1.52
APOEP02649 RNU6-513P-201ENST00000516104 104 ntBASIC5.56□□□□□ -1.52
APOEP02649 RNU6-941P-201ENST00000516346 108 ntBASIC5.56□□□□□ -1.52
APOEP02649 SCARNA20.4-201ENST00000516969 131 ntBASIC5.56□□□□□ -1.52
APOEP02649 YWHABP2-201ENST00000540201 713 ntBASIC5.56□□□□□ -1.52
APOEP02649 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.56□□□□□ -1.52
APOEP02649 AL390334.1-201ENST00000556395 450 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC106730.2-201ENST00000566641 540 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 AC108738.1-201ENST00000603703 237 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC005252.1-201ENST00000604518 1063 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC244107.2-201ENST00000611773 76 ntBASIC5.56□□□□□ -1.52
APOEP02649 AL122125.1-201ENST00000616999 600 ntBASIC5.56□□□□□ -1.52
APOEP02649 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
APOEP02649 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.56□□□□□ -1.52
APOEP02649 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOEP02649 RARSP1-201ENST00000542842 1418 ntBASIC5.56□□□□□ -1.52
APOEP02649 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOEP02649 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOEP02649 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
APOEP02649 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.55□□□□□ -1.52
APOEP02649 RNA5SP241-201ENST00000391326 114 ntBASIC5.55□□□□□ -1.52
APOEP02649 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
APOEP02649 SETP15-201ENST00000412724 337 ntBASIC5.55□□□□□ -1.52
APOEP02649 AC108075.1-201ENST00000424692 529 ntBASIC5.55□□□□□ -1.52
APOEP02649 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.55□□□□□ -1.52
APOEP02649 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.55□□□□□ -1.52
APOEP02649 UBA52P7-201ENST00000486088 380 ntBASIC5.55□□□□□ -1.52
APOEP02649 CDC42P3-201ENST00000518493 633 ntBASIC5.55□□□□□ -1.52
APOEP02649 IGLV2-28-201ENST00000520681 304 ntBASIC5.55□□□□□ -1.52
APOEP02649 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.55□□□□□ -1.52
APOEP02649 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.55□□□□□ -1.52
APOEP02649 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.55□□□□□ -1.52
APOEP02649 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.55□□□□□ -1.52
APOEP02649 RN7SL290P-201ENST00000578661 300 ntBASIC5.55□□□□□ -1.52
APOEP02649 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms