Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.22□□□□□ -1.57
KRT6AP02538 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.22□□□□□ -1.57
KRT6AP02538 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
KRT6AP02538 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
KRT6AP02538 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
KRT6AP02538 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRT6AP02538 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT6AP02538 CASC19-221ENST00000641309 1382 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
KRT6AP02538 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
KRT6AP02538 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT6AP02538 RN7SKP292-201ENST00000365522 317 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 RNA5SP122-201ENST00000384457 108 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 CXADRP1-201ENST00000398098 1095 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 Z93019.1-201ENST00000416450 973 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 BMS1P17-202ENST00000416720 316 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 FMO7P-201ENST00000436045 768 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT6AP02538 OR52E3P-201ENST00000452083 936 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT6AP02538 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT6AP02538 AL049874.2-201ENST00000492636 288 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 AC092709.1-201ENST00000521355 1045 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT6AP02538 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT6AP02538 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.21□□□□□ -1.58
KRT6AP02538 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT6AP02538 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT6AP02538 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT6AP02538 VN1R81P-201ENST00000602085 372 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT6AP02538 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT6AP02538 AC100767.2-201ENST00000604840 693 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 CXADRP3-202ENST00000617265 1100 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT6AP02538 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT6AP02538 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
KRT6AP02538 MTCO1P15-201ENST00000529569 1526 ntBASIC5.21□□□□□ -1.58
KRT6AP02538 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
KRT6AP02538 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
KRT6AP02538 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRT6AP02538 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT6AP02538 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 RN7SKP153-201ENST00000365026 316 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT6AP02538 LYPLA1P3-201ENST00000402650 695 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 SNORA79B-201ENST00000410557 148 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 TNPO1P1-201ENST00000423641 1138 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 AC124944.2-201ENST00000429866 1242 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT6AP02538 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT6AP02538 HMGN1P2-201ENST00000445197 310 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC073909.1-201ENST00000447112 999 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC094085.1-201ENST00000468914 584 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
KRT6AP02538 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT6AP02538 HMGB1P44-201ENST00000508597 572 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC138866.2-201ENST00000508650 584 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 IMPA1P1-201ENST00000510718 842 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT6AP02538 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.2□□□□□ -1.58
KRT6AP02538 AL358913.1-201ENST00000554342 121 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT6AP02538 AC005341.1-201ENST00000571086 708 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC010547.6-201ENST00000571789 193 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT6AP02538 AC091932.2-201ENST00000623014 291 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 AC132068.1-201ENST00000623805 459 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 CU639417.4-201ENST00000623928 207 ntBASIC5.2□□□□□ -1.58
KRT6AP02538 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
KRT6AP02538 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KRT6AP02538 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT6AP02538 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRT6AP02538 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT6AP02538 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT6AP02538 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms