Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC133552.1-201ENST00000569988 4007 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC093849.1-201ENST00000563631 2209 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 RPL23P2-201ENST00000320371 421 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL589647.1-201ENST00000402485 466 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNA5SP487-201ENST00000410186 122 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 RPL37P18-201ENST00000411602 243 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL139128.1-201ENST00000413921 941 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC010740.1-201ENST00000417035 684 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 OTX2P1-201ENST00000450956 354 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 CBX1P5-201ENST00000475330 559 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 ASNSP4-201ENST00000511103 447 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 MTND6P2-201ENST00000512226 524 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 HIRAP1-201ENST00000605318 787 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TMX2-CTNND1H3BSU7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC116158.1-201ENST00000560231 2129 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC211486.3-201ENST00000412694 621 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 PRUNEP1-201ENST00000425846 705 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 NANOGP9-201ENST00000439890 892 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL359265.1-201ENST00000440296 795 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC073850.1-201ENST00000449243 255 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 RN7SKP66-201ENST00000516681 231 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC139697.1-201ENST00000548429 745 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC093591.2-201ENST00000565254 3843 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC005341.1-201ENST00000571086 708 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC104785.1-201ENST00000603220 588 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC239803.2-201ENST00000610161 430 ntBASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TMX2-CTNND1H3BSU7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC011755.1-201ENST00000623763 2049 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 RPL7P40-201ENST00000481703 745 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 FTH1P11-201ENST00000517577 551 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 SETP3-201ENST00000581726 813 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC006116.3-201ENST00000592968 361 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC069307.1-201ENST00000602820 447 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 TAS2R6P-201ENST00000605022 826 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms