Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.48■□□□□ 0.07
ClcnkaQ9WUB7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ClcnkaQ9WUB7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Gm10252-201ENSMUST00000209541 832 ntBASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Il3ra-202ENSMUST00000223589 738 ntBASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ClcnkaQ9WUB7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
ClcnkaQ9WUB7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ClcnkaQ9WUB7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ClcnkaQ9WUB7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ClcnkaQ9WUB7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ClcnkaQ9WUB7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Gm27463-201ENSMUST00000183569 57 ntBASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ClcnkaQ9WUB7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Gm30025-201ENSMUST00000218555 728 ntBASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms