Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Q9CYI0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9CYI0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Q9CYI0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.56■□□□□ 0.56
Q9CYI0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Q9CYI0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.56■□□□□ 0.56
Q9CYI0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CYI0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Q9CYI0 Gm11950-201ENSMUST00000121615 838 ntBASIC18.55■□□□□ 0.56
Q9CYI0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.55■□□□□ 0.56
Q9CYI0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Q9CYI0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.55■□□□□ 0.56
Q9CYI0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CYI0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Q9CYI0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.54■□□□□ 0.56
Q9CYI0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.54■□□□□ 0.56
Q9CYI0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Gm37722-201ENSMUST00000193757 208 ntBASIC18.54■□□□□ 0.56
Q9CYI0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.54■□□□□ 0.56
Q9CYI0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CYI0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Q9CYI0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.53■□□□□ 0.56
Q9CYI0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Q9CYI0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.53■□□□□ 0.56
Q9CYI0 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.53■□□□□ 0.56
Q9CYI0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.53■□□□□ 0.56
Q9CYI0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CYI0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.53■□□□□ 0.56
Q9CYI0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Q9CYI0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.52■□□□□ 0.56
Q9CYI0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Q9CYI0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.52■□□□□ 0.56
Q9CYI0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Q9CYI0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.52■□□□□ 0.56
Q9CYI0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CYI0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms