Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Gm10231-201ENSMUST00000181584 441 ntBASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Gm10175-202ENSMUST00000208752 441 ntBASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha3Q91Y16 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha3Q91Y16 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha3Q91Y16 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha3Q91Y16 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Gm18958-201ENSMUST00000174258 762 ntBASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms