Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Gm27389-201ENSMUST00000183622 195 ntBASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Gm18115-201ENSMUST00000221209 621 ntBASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Phf7-203ENSMUST00000226565 1971 ntBASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha9Q91Y11 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Gm21559-201ENSMUST00000220638 855 ntBASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Gm8587-201ENSMUST00000076538 843 ntBASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha9Q91Y11 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha9Q91Y11 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Gm10013-201ENSMUST00000106074 672 ntBASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Gm13836-201ENSMUST00000121159 501 ntBASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms