Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sfr1Q8BP27 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Gm7370-201ENSMUST00000219471 767 ntBASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sfr1Q8BP27 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sfr1Q8BP27 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sfr1Q8BP27 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.08■□□□□ 0.33
Sfr1Q8BP27 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Sfr1Q8BP27 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sfr1Q8BP27 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sfr1Q8BP27 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Gm10231-201ENSMUST00000181584 441 ntBASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Gm10175-202ENSMUST00000208752 441 ntBASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Sfr1Q8BP27 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Gm27000-201ENSMUST00000182943 842 ntBASIC17.06■□□□□ 0.32
Sfr1Q8BP27 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sfr1Q8BP27 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms