Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm37292-201ENSMUST00000192062 758 ntBASIC18.03■□□□□ 0.48
Nop53Q8BK35 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.03■□□□□ 0.48
Nop53Q8BK35 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nop53Q8BK35 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nop53Q8BK35 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nop53Q8BK35 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nop53Q8BK35 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nop53Q8BK35 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.02■□□□□ 0.48
Nop53Q8BK35 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.02■□□□□ 0.48
Nop53Q8BK35 Gm10517-202ENSMUST00000192970 758 ntBASIC18.02■□□□□ 0.48
Nop53Q8BK35 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nop53Q8BK35 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.02■□□□□ 0.47
Nop53Q8BK35 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nop53Q8BK35 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nop53Q8BK35 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Nop53Q8BK35 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Nop53Q8BK35 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nop53Q8BK35 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.01■□□□□ 0.47
Nop53Q8BK35 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nop53Q8BK35 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nop53Q8BK35 Gm15378-201ENSMUST00000121894 207 ntBASIC18■□□□□ 0.47
Nop53Q8BK35 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18■□□□□ 0.47
Nop53Q8BK35 AC154649.1-201ENSMUST00000227392 384 ntBASIC18■□□□□ 0.47
Nop53Q8BK35 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nop53Q8BK35 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Gm13216-201ENSMUST00000117145 591 ntBASIC17.99■□□□□ 0.47
Nop53Q8BK35 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nop53Q8BK35 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Nop53Q8BK35 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop53Q8BK35 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.98■□□□□ 0.47
Nop53Q8BK35 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms