Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Scn3bQ8BHK2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn3bQ8BHK2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Gm11643-201ENSMUST00000119578 864 ntBASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.66■□□□□ 0.1
Scn3bQ8BHK2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scn3bQ8BHK2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Scn3bQ8BHK2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Scn3bQ8BHK2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn3bQ8BHK2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn3bQ8BHK2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms