Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx42Q810A7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx42Q810A7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx42Q810A7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ddx42Q810A7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ddx42Q810A7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ddx42Q810A7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx42Q810A7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.09■□□□□ 0.33
Ddx42Q810A7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx42Q810A7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx42Q810A7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx42Q810A7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx42Q810A7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx42Q810A7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Gm7977-201ENSMUST00000193787 748 ntBASIC17.06■□□□□ 0.32
Ddx42Q810A7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.06■□□□□ 0.32
Ddx42Q810A7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx42Q810A7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms