Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav7d-3Q5R1I1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav7d-3Q5R1I1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Gm27275-201ENSMUST00000184318 272 ntBASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Gm42545-201ENSMUST00000202755 922 ntBASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-3Q5R1I1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav7d-3Q5R1I1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.37□□□□□ -0.43
Trav7d-3Q5R1I1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms