Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rufy4Q3TYX8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rufy4Q3TYX8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rufy4Q3TYX8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rufy4Q3TYX8 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.52■□□□□ 0.56
Rufy4Q3TYX8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Rufy4Q3TYX8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rufy4Q3TYX8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rufy4Q3TYX8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rufy4Q3TYX8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rufy4Q3TYX8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rufy4Q3TYX8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Gm14859-201ENSMUST00000117752 357 ntBASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Gm44450-201ENSMUST00000199528 114 ntBASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.49■□□□□ 0.55
Rufy4Q3TYX8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rufy4Q3TYX8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rufy4Q3TYX8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rufy4Q3TYX8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rufy4Q3TYX8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rufy4Q3TYX8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms