Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.96□□□□□ -0.17
Nkx2-1P50220 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.96□□□□□ -0.17
Nkx2-1P50220 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nkx2-1P50220 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Nkx2-1P50220 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-1P50220 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Nkx2-1P50220 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-1P50220 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-1P50220 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-1P50220 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Mir2861-201ENSMUST00000175539 82 ntBASIC13.95□□□□□ -0.18
Nkx2-1P50220 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-1P50220 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Gm6211-202ENSMUST00000167849 925 ntBASIC13.94□□□□□ -0.18
Nkx2-1P50220 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.94□□□□□ -0.18
Nkx2-1P50220 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-1P50220 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-1P50220 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.93□□□□□ -0.18
Nkx2-1P50220 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms