Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Pde6aP27664 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.5■□□□□ 0.71
Pde6aP27664 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.5■□□□□ 0.71
Pde6aP27664 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6aP27664 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pde6aP27664 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.49■□□□□ 0.71
Pde6aP27664 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.49■□□□□ 0.71
Pde6aP27664 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.49■□□□□ 0.71
Pde6aP27664 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.49■□□□□ 0.71
Pde6aP27664 Gm18115-201ENSMUST00000221209 621 ntBASIC19.49■□□□□ 0.71
Pde6aP27664 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pde6aP27664 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6aP27664 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pde6aP27664 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Gm44450-201ENSMUST00000199528 114 ntBASIC19.48■□□□□ 0.71
Pde6aP27664 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pde6aP27664 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.48■□□□□ 0.71
Pde6aP27664 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.48■□□□□ 0.71
Pde6aP27664 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6aP27664 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pde6aP27664 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6aP27664 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.47■□□□□ 0.71
Pde6aP27664 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Gm11336-201ENSMUST00000118168 334 ntBASIC19.46■□□□□ 0.71
Pde6aP27664 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.46■□□□□ 0.71
Pde6aP27664 Gm6659-201ENSMUST00000174752 547 ntBASIC19.46■□□□□ 0.71
Pde6aP27664 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pde6aP27664 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pde6aP27664 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6aP27664 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.45■□□□□ 0.7
Pde6aP27664 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pde6aP27664 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pde6aP27664 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.45■□□□□ 0.7
Pde6aP27664 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.45■□□□□ 0.7
Pde6aP27664 Gm37722-201ENSMUST00000193757 208 ntBASIC19.45■□□□□ 0.7
Pde6aP27664 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6aP27664 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.45■□□□□ 0.7
Pde6aP27664 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms