Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
P04224 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P04224 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.8□□□□□ -0.04
P04224 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
P04224 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
P04224 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P04224 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
P04224 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.8□□□□□ -0.04
P04224 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04224 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
P04224 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
P04224 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
P04224 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.79□□□□□ -0.04
P04224 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.79□□□□□ -0.04
P04224 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.79□□□□□ -0.04
P04224 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.79□□□□□ -0.04
P04224 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
P04224 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04224 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.79□□□□□ -0.04
P04224 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P04224 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.78□□□□□ -0.04
P04224 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.78□□□□□ -0.04
P04224 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.78□□□□□ -0.04
P04224 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.78□□□□□ -0.04
P04224 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04224 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04224 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04224 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04224 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
P04224 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
P04224 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04224 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
P04224 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
P04224 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.77□□□□□ -0.05
P04224 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.77□□□□□ -0.05
P04224 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04224 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
P04224 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms