Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 ECEL1P3-201ENST00000427961 737 ntBASIC29.11■■■□□ 2.25
HFM1A2PYH4 AL355355.2-201ENST00000442321 338 ntBASIC29.11■■■□□ 2.25
HFM1A2PYH4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 DGCR10-201ENST00000609839 495 ntBASIC29.1■■■□□ 2.25
HFM1A2PYH4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC29.1■■■□□ 2.25
HFM1A2PYH4 RCC2P6-201ENST00000526625 1557 ntBASIC29.1■■■□□ 2.25
HFM1A2PYH4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HFM1A2PYH4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
HFM1A2PYH4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
HFM1A2PYH4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
HFM1A2PYH4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
HFM1A2PYH4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
HFM1A2PYH4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC29.08■■■□□ 2.25
HFM1A2PYH4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
HFM1A2PYH4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
HFM1A2PYH4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
HFM1A2PYH4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC29.08■■■□□ 2.25
HFM1A2PYH4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC29.08■■■□□ 2.25
HFM1A2PYH4 MIR6786-201ENST00000616843 113 ntBASIC29.08■■■□□ 2.25
HFM1A2PYH4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC29.08■■■□□ 2.25
HFM1A2PYH4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
HFM1A2PYH4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
HFM1A2PYH4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 FAM210CP-201ENST00000445714 574 ntBASIC29.07■■■□□ 2.24
HFM1A2PYH4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC29.07■■■□□ 2.24
HFM1A2PYH4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
HFM1A2PYH4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
HFM1A2PYH4 AC125437.2-201ENST00000625180 2167 ntBASIC29.06■■■□□ 2.24
HFM1A2PYH4 AC087499.1-201ENST00000418141 1075 ntBASIC29.06■■■□□ 2.24
HFM1A2PYH4 AC011506.1-201ENST00000474329 610 ntBASIC29.06■■■□□ 2.24
HFM1A2PYH4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
HFM1A2PYH4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC29.06■■■□□ 2.24
HFM1A2PYH4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC29.06■■■□□ 2.24
HFM1A2PYH4 AP000525.1-201ENST00000608286 694 ntBASIC29.06■■■□□ 2.24
HFM1A2PYH4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC29.06■■■□□ 2.24
HFM1A2PYH4 AC012306.2-201ENST00000609350 630 ntBASIC29.06■■■□□ 2.24
HFM1A2PYH4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
HFM1A2PYH4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC29.06■■■□□ 2.24
HFM1A2PYH4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
HFM1A2PYH4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
HFM1A2PYH4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC29.05■■■□□ 2.24
HFM1A2PYH4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC29.05■■■□□ 2.24
HFM1A2PYH4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC29.05■■■□□ 2.24
HFM1A2PYH4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
HFM1A2PYH4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC29.04■■■□□ 2.24
HFM1A2PYH4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
HFM1A2PYH4 FSCN1P1-201ENST00000568912 1481 ntBASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms