Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm4968-201ENSMUST00000071458 858 ntBASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13d-4A0A0G2JFX3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm6576-201ENSMUST00000169678 883 ntBASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm2559-201ENSMUST00000201323 363 ntBASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm11643-201ENSMUST00000119578 864 ntBASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Mir6349-201ENSMUST00000184059 97 ntBASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm10138-203ENSMUST00000206952 366 ntBASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms