Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav11A0A0B4J1J9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Mir2861-201ENSMUST00000175539 82 ntBASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Gm44549-201ENSMUST00000208351 577 ntBASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav11A0A0B4J1J9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav11A0A0B4J1J9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav11A0A0B4J1J9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 AV356131-201ENSMUST00000206201 750 ntBASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav11A0A0B4J1J9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms