Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv16A0A0B4J1H3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv16A0A0B4J1H3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv16A0A0B4J1H3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms