Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-3A0A075B695 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9d-3A0A075B695 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.02□□□□□ -0.48
Trav9d-3A0A075B695 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Gm12085-201ENSMUST00000119263 940 ntBASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9d-3A0A075B695 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Mir1199-201ENSMUST00000117015 119 ntBASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-3A0A075B695 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-3A0A075B695 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-3A0A075B695 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-3A0A075B695 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms