Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav4n-4A0A075B615 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4n-4A0A075B615 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4n-4A0A075B615 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Asic1-205ENSMUST00000228185 1818 ntBASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4n-4A0A075B615 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms