Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC019206.1-201ENST00000621938 425 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 RN7SKP153-201ENST00000365026 316 ntBASIC6.56□□□□□ -1.36
SCN11AQ9UI33 U3.30-201ENST00000391308 210 ntBASIC6.56□□□□□ -1.36
SCN11AQ9UI33 RN7SKP17-201ENST00000411242 351 ntBASIC6.56□□□□□ -1.36
SCN11AQ9UI33 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AC020779.1-201ENST00000478757 796 ntBASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 AC004076.2-201ENST00000620532 3323 ntBASIC6.56□□□□□ -1.36
SCN11AQ9UI33 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN11AQ9UI33 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 ZNF652P1-201ENST00000442420 1309 ntBASIC6.55□□□□□ -1.36
SCN11AQ9UI33 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 MIR589-201ENST00000385238 99 ntBASIC6.55□□□□□ -1.36
SCN11AQ9UI33 AC114755.2-201ENST00000413520 361 ntBASIC6.55□□□□□ -1.36
SCN11AQ9UI33 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 MIR5096-201ENST00000583713 70 ntBASIC6.55□□□□□ -1.36
SCN11AQ9UI33 EIF1P5-201ENST00000585002 234 ntBASIC6.55□□□□□ -1.36
SCN11AQ9UI33 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 AL512782.1-201ENST00000603093 364 ntBASIC6.55□□□□□ -1.36
SCN11AQ9UI33 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SCN11AQ9UI33 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC079741.1-201ENST00000321498 212 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 RNA5SP345-201ENST00000410646 108 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 RPL23AP56-201ENST00000460778 453 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 NDUFA5P9-201ENST00000472609 340 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 MTCYBP13-201ENST00000578634 1093 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 MIR6780A-201ENST00000615089 68 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC012618.3-205ENST00000637896 1496 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC245028.1-201ENST00000423259 256 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 PRPF38AP2-201ENST00000438179 851 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC009963.2-201ENST00000453431 138 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 AC068790.4-201ENST00000602474 263 ntBASIC6.54□□□□□ -1.36
SCN11AQ9UI33 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN11AQ9UI33 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms