Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 KARSP3-201ENST00000571212 1504 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC023490.2-201ENST00000359859 470 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 MIR365B-201ENST00000362317 111 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 SNORD116.1-201ENST00000365628 92 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 SNORA64.3-201ENST00000365647 134 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 RNU6-224P-201ENST00000384055 107 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 U6.112-201ENST00000384129 70 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 Y_RNA.578-201ENST00000390903 88 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 RPL7P27-201ENST00000403775 720 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC006366.1-201ENST00000422002 759 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 MOB1AP1-201ENST00000430903 535 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 MTND1P4-201ENST00000435196 415 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 RPL6P30-201ENST00000443382 862 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AP000936.2-201ENST00000447151 681 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AL096803.2-201ENST00000450032 677 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC022336.1-201ENST00000475510 337 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC093890.1-201ENST00000502554 540 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 SNORA74.1-201ENST00000516320 180 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 PDCL2P2-201ENST00000533651 189 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 GARSP1-201ENST00000570895 719 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 MTND4LP24-201ENST00000572277 291 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 RSL24D1P11-201ENST00000591045 491 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC073648.5-201ENST00000603502 305 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 NDUFB9P1-201ENST00000604683 510 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC109347.2-201ENST00000610220 349 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 MIR6811-201ENST00000620409 58 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AL160394.1-201ENST00000624765 724 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 OR8G3P-202ENST00000641572 1255 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 GTF2IP4-201ENST00000453092 2054 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 MTND5P11-201ENST00000511037 1812 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC022905.1-201ENST00000503430 3048 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 LINC01616-201ENST00000561816 2280 ntBASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.71□□□□□ -1.5
PARPBPQ9NWS1 AC083837.1-201ENST00000565297 2994 ntBASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 ZNF90P1-201ENST00000480493 1951 ntBASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 SNORD56.4-201ENST00000363883 71 ntBASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.7□□□□□ -1.5
PARPBPQ9NWS1 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms