Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RPS27AP6-201ENST00000427962 448 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.73□□□□□ -1.33
ABCA3Q99758 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.73□□□□□ -1.33
ABCA3Q99758 HMGN1P9-201ENST00000515212 298 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 IGKV2D-10-201ENST00000520194 281 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 AP003080.1-202ENST00000526526 915 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.73□□□□□ -1.33
ABCA3Q99758 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 BNIP3P22-201ENST00000593399 556 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.73□□□□□ -1.33
ABCA3Q99758 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 AC133552.1-201ENST00000569988 4007 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ABCA3Q99758 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.73□□□□□ -1.33
ABCA3Q99758 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
ABCA3Q99758 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ABCA3Q99758 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 RNA5SP28-201ENST00000363841 119 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 RPL21P108-201ENST00000413857 481 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.73□□□□□ -1.33
ABCA3Q99758 AF186996.5-201ENST00000418098 904 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.73□□□□□ -1.33
ABCA3Q99758 RPS24P16-201ENST00000497294 392 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 SEPT10P1-201ENST00000517342 1162 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.73□□□□□ -1.33
ABCA3Q99758 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.73□□□□□ -1.33
ABCA3Q99758 AL109766.1-201ENST00000555080 552 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 AC021483.2-201ENST00000567415 758 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 AL356608.1-201ENST00000610034 820 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 AC021106.3-201ENST00000623925 531 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.73□□□□□ -1.33
ABCA3Q99758 AC005225.5-201ENST00000623547 2225 ntBASIC6.73□□□□□ -1.33
ABCA3Q99758 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 CENPIP1-201ENST00000425713 902 ntBASIC6.72□□□□□ -1.33
ABCA3Q99758 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.72□□□□□ -1.33
ABCA3Q99758 MED28P3-201ENST00000444288 531 ntBASIC6.72□□□□□ -1.33
ABCA3Q99758 ARL2BPP10-201ENST00000446487 531 ntBASIC6.72□□□□□ -1.33
ABCA3Q99758 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.72□□□□□ -1.33
ABCA3Q99758 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.72□□□□□ -1.33
ABCA3Q99758 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
ABCA3Q99758 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.72□□□□□ -1.33
ABCA3Q99758 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ABCA3Q99758 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.71□□□□□ -1.33
ABCA3Q99758 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.71□□□□□ -1.33
ABCA3Q99758 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ABCA3Q99758 AC009951.1-201ENST00000623674 2614 ntBASIC6.71□□□□□ -1.33
ABCA3Q99758 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ABCA3Q99758 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ABCA3Q99758 RN7SKP263-201ENST00000411194 309 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 AC090018.1-201ENST00000434369 367 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 RN7SL443P-201ENST00000464331 290 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 RN7SL319P-201ENST00000480656 221 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.71□□□□□ -1.34
ABCA3Q99758 SLC25A15P5-201ENST00000508033 253 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.71□□□□□ -1.34
ABCA3Q99758 AC027667.1-201ENST00000545814 304 ntBASIC6.71□□□□□ -1.34
ABCA3Q99758 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ABCA3Q99758 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ABCA3Q99758 MTCO1P15-201ENST00000529569 1526 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
ABCA3Q99758 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 SNORD113.2-201ENST00000364166 89 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 AL021331.1-201ENST00000402817 582 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 RPL7AP61-201ENST00000443410 636 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 AC011276.1-201ENST00000469688 323 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 AC019322.1-201ENST00000571869 389 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms