Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC068313.1-201ENST00000604028 1008 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC008759.3-201ENST00000613300 508 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 RFPL4AP6-201ENST00000616792 846 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC126544.2-201ENST00000625174 749 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC099654.6-201ENST00000636487 512 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 OR6C71P-202ENST00000641886 1107 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AL359715.4-201ENST00000606629 1436 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 HSPD1P7-201ENST00000447985 1686 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 HSPD1P14-201ENST00000432666 1618 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC092642.1-201ENST00000392417 425 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 GSTA12P-201ENST00000402398 508 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AL132875.1-201ENST00000403623 949 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 GNG5P5-201ENST00000420444 220 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 VN1R42P-201ENST00000424651 344 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC006994.1-201ENST00000438212 839 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 TPTE2P3-201ENST00000441562 1189 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 snoU109.3-201ENST00000459477 145 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 RN7SL72P-201ENST00000460697 269 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 RPS3AP6-201ENST00000484430 795 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC025458.1-201ENST00000506046 166 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 Y_RNA.710-201ENST00000516975 110 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 HAUS1P3-201ENST00000523909 662 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 OR4A43P-201ENST00000532938 908 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AP001858.2-201ENST00000536213 601 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 RN7SL475P-201ENST00000583379 298 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 BNIP3P38-201ENST00000601117 544 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC079880.2-201ENST00000603790 1213 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC067838.1-201ENST00000606064 577 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AL512652.1-201ENST00000619006 500 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AL078595.3-201ENST00000623815 1166 ntBASIC5.79□□□□□ -1.48
VPS50Q96JG6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS50Q96JG6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS50Q96JG6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC083843.2-201ENST00000568248 6253 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 SUGT1P2-201ENST00000379452 992 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 MIR137-201ENST00000385223 102 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms