Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC011379.1-201ENST00000508713 3025 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 IGKV7-3-201ENST00000357453 298 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 RNA5SP387-201ENST00000364226 106 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 SNORA70C-201ENST00000384538 135 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 ST13P16-201ENST00000401760 781 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 AL596266.1-201ENST00000448132 400 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 AC105254.2-201ENST00000603636 436 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 AP005131.7-201ENST00000610087 611 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LRRK2Q5S007 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRK2Q5S007 ZNF969P-201ENST00000510345 2341 ntBASIC4.57□□□□□ -1.68
LRRK2Q5S007 THAP12P9-201ENST00000503971 2360 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC007996.1-201ENST00000620414 2821 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 MIR129-1-201ENST00000384972 72 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC112498.1-201ENST00000444401 332 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AP000797.2-201ENST00000475768 606 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC013356.1-201ENST00000489027 564 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 RN7SKP260-201ENST00000516907 149 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 OR8G5-201ENST00000524943 1041 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 OR7E128P-201ENST00000532736 1024 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 MIR3124-201ENST00000582636 67 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 RPL12P25-202ENST00000598100 674 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC062029.1-202ENST00000606164 3651 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 RN7SKP95-201ENST00000362860 303 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 RPS27AP12-201ENST00000429552 465 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 DNAJA1P6-201ENST00000437347 354 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 NDUFB4P12-201ENST00000513465 390 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AP005119.2-201ENST00000579735 1105 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 MEMO1P5-201ENST00000604810 406 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 USP9YP3-201ENST00000434481 1766 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRK2Q5S007 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 AL137100.1-201ENST00000556703 1620 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 MAPK10-344ENST00000641718 3746 ntBASIC4.56□□□□□ -1.68
LRRK2Q5S007 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LRRK2Q5S007 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 RNU4-25P-201ENST00000410569 230 ntBASIC4.55□□□□□ -1.68
LRRK2Q5S007 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 AL731534.1-201ENST00000434711 269 ntBASIC4.55□□□□□ -1.68
LRRK2Q5S007 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRRK2Q5S007 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 MORF4L1P3-201ENST00000525966 950 ntBASIC4.55□□□□□ -1.68
LRRK2Q5S007 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 AL139041.1-201ENST00000605480 610 ntBASIC4.55□□□□□ -1.68
LRRK2Q5S007 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRRK2Q5S007 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LRRK2Q5S007 AL022322.2-201ENST00000624072 20397 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms