Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GPS2P1-201ENST00000411761 986 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1A1P48729 NAP1L4P2-201ENST00000425958 899 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC090018.1-201ENST00000434369 367 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC012075.1-201ENST00000436549 580 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 CBX1P2-201ENST00000453841 458 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC239798.3-201ENST00000454459 408 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC104109.1-201ENST00000498563 436 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 IGBP1P4-201ENST00000503202 879 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC021193.1-201ENST00000511607 420 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AP004607.2-201ENST00000533949 322 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AL359219.2-201ENST00000555184 348 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC009852.2-201ENST00000567898 485 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AL713998.2-201ENST00000604538 1198 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC000068.2-201ENST00000608816 460 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AL356608.1-201ENST00000610034 820 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC073575.2-201ENST00000614212 627 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AC074140.1-201ENST00000621617 208 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1A1P48729 MAPK10-328ENST00000641553 4009 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1A1P48729 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CSNK1A1P48729 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AL513548.1-201ENST00000562904 1724 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC093591.2-201ENST00000565254 3843 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC079298.1-201ENST00000625026 1619 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AL133388.1-201ENST00000404509 287 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AL513325.1-201ENST00000417716 1034 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 RPS11P7-201ENST00000442125 465 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 GAPDHP25-201ENST00000447061 1001 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC023141.9-201ENST00000458734 412 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 RPL35AP19-201ENST00000469425 329 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC022133.1-201ENST00000490961 571 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 RN7SL447P-201ENST00000494711 245 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 RNA5SP230-201ENST00000517039 122 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AP002981.1-201ENST00000517692 975 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 HMGB1P40-201ENST00000525121 540 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 BLZF2P-201ENST00000553776 1130 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 MIR4310-201ENST00000582950 57 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 MIR4660-201ENST00000583549 74 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AL589674.2-201ENST00000604304 337 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC092944.2-201ENST00000605443 889 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms