Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.64□□□□□ -1.35
RFC4P35249 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.64□□□□□ -1.35
RFC4P35249 TPT1P12-201ENST00000448968 492 ntBASIC6.64□□□□□ -1.35
RFC4P35249 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.64□□□□□ -1.35
RFC4P35249 RN7SL244P-201ENST00000493405 297 ntBASIC6.64□□□□□ -1.35
RFC4P35249 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.64□□□□□ -1.35
RFC4P35249 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.64□□□□□ -1.35
RFC4P35249 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.64□□□□□ -1.35
RFC4P35249 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.64□□□□□ -1.35
RFC4P35249 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.64□□□□□ -1.35
RFC4P35249 AC068790.4-201ENST00000602474 263 ntBASIC6.64□□□□□ -1.35
RFC4P35249 MIR7703-201ENST00000620784 77 ntBASIC6.64□□□□□ -1.35
RFC4P35249 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
RFC4P35249 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.64□□□□□ -1.35
RFC4P35249 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.64□□□□□ -1.35
RFC4P35249 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 AC005225.5-201ENST00000623547 2225 ntBASIC6.64□□□□□ -1.35
RFC4P35249 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
RFC4P35249 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RFC4P35249 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFC4P35249 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.63□□□□□ -1.35
RFC4P35249 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFC4P35249 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFC4P35249 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFC4P35249 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFC4P35249 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFC4P35249 RN7SKP113-201ENST00000363891 295 ntBASIC6.63□□□□□ -1.35
RFC4P35249 RNA5SP505-201ENST00000364748 108 ntBASIC6.63□□□□□ -1.35
RFC4P35249 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFC4P35249 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.63□□□□□ -1.35
RFC4P35249 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.63□□□□□ -1.35
RFC4P35249 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.63□□□□□ -1.35
RFC4P35249 DNAJC19P7-201ENST00000428811 344 ntBASIC6.63□□□□□ -1.35
RFC4P35249 RPS29P10-201ENST00000439197 166 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 SNORD125-201ENST00000459538 96 ntBASIC6.63□□□□□ -1.35
RFC4P35249 RN7SL354P-201ENST00000469282 294 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 C1GALT1P3-201ENST00000522049 819 ntBASIC6.63□□□□□ -1.35
RFC4P35249 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.63□□□□□ -1.35
RFC4P35249 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.63□□□□□ -1.35
RFC4P35249 AP006289.1-201ENST00000538089 277 ntBASIC6.63□□□□□ -1.35
RFC4P35249 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 OR11H3P-201ENST00000554547 982 ntBASIC6.63□□□□□ -1.35
RFC4P35249 BGLT3-201ENST00000564523 994 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC018558.5-201ENST00000565840 952 ntBASIC6.63□□□□□ -1.35
RFC4P35249 UBE2FP2-201ENST00000566646 462 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC034229.2-201ENST00000566945 2508 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.63□□□□□ -1.35
RFC4P35249 AC009027.1-201ENST00000604510 479 ntBASIC6.63□□□□□ -1.35
RFC4P35249 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.63□□□□□ -1.35
RFC4P35249 AC135068.5-201ENST00000624197 983 ntBASIC6.63□□□□□ -1.35
RFC4P35249 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.63□□□□□ -1.35
RFC4P35249 MFSD8-216ENST00000641147 4009 ntBASIC6.63□□□□□ -1.35
RFC4P35249 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.63□□□□□ -1.35
RFC4P35249 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RFC4P35249 AL449283.1-201ENST00000602631 3403 ntBASIC6.62□□□□□ -1.35
RFC4P35249 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
RFC4P35249 AC120036.2-201ENST00000509729 1474 ntBASIC6.62□□□□□ -1.35
RFC4P35249 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.62□□□□□ -1.35
RFC4P35249 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 RNA5SP428-201ENST00000365129 132 ntBASIC6.62□□□□□ -1.35
RFC4P35249 SNORD56.6-201ENST00000384569 71 ntBASIC6.62□□□□□ -1.35
RFC4P35249 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RFC4P35249 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 AC119751.6-201ENST00000416712 186 ntBASIC6.62□□□□□ -1.35
RFC4P35249 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.62□□□□□ -1.35
RFC4P35249 RPL34P20-201ENST00000442771 351 ntBASIC6.62□□□□□ -1.35
RFC4P35249 AC112498.1-201ENST00000444401 332 ntBASIC6.62□□□□□ -1.35
RFC4P35249 AC073264.2-201ENST00000448886 166 ntBASIC6.62□□□□□ -1.35
RFC4P35249 AC063943.1-201ENST00000465434 453 ntBASIC6.62□□□□□ -1.35
RFC4P35249 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.62□□□□□ -1.35
RFC4P35249 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.62□□□□□ -1.35
RFC4P35249 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RFC4P35249 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.62□□□□□ -1.35
RFC4P35249 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFC4P35249 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.62□□□□□ -1.35
RFC4P35249 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
RFC4P35249 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
RFC4P35249 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RFC4P35249 XKRY2-202ENST00000623874 1581 ntBASIC6.61□□□□□ -1.35
RFC4P35249 XKRY-202ENST00000624960 1581 ntBASIC6.61□□□□□ -1.35
RFC4P35249 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFC4P35249 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.61□□□□□ -1.35
RFC4P35249 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms