Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
CLIP1P30622 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 FAR2P2-201ENST00000413041 594 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP1P30622 FAR2P4-202ENST00000425399 584 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP1P30622 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC8.2□□□□□ -1.1
CLIP1P30622 MORF4L1P4-201ENST00000450245 976 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC8.2□□□□□ -1.1
CLIP1P30622 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP1P30622 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 AC021193.1-201ENST00000511607 420 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP1P30622 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 AP000550.3-201ENST00000637734 379 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CLIP1P30622 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
CLIP1P30622 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC8.2□□□□□ -1.1
CLIP1P30622 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLIP1P30622 RNA5SP455-201ENST00000365190 119 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP1P30622 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CLIP1P30622 AC022133.1-201ENST00000490961 571 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 AC093890.1-201ENST00000502554 540 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.2□□□□□ -1.1
CLIP1P30622 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 EDDM3DP-201ENST00000554692 434 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 uc_338.18-201ENST00000615451 175 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 MIR6810-201ENST00000622701 70 ntBASIC8.2□□□□□ -1.1
CLIP1P30622 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CLIP1P30622 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP1P30622 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CLIP1P30622 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP1P30622 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLIP1P30622 RNA5SP428-201ENST00000365129 132 ntBASIC8.19□□□□□ -1.1
CLIP1P30622 RNA5SP241-201ENST00000391326 114 ntBASIC8.19□□□□□ -1.1
CLIP1P30622 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP1P30622 HMGN2P25-201ENST00000486956 268 ntBASIC8.19□□□□□ -1.1
CLIP1P30622 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP1P30622 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.19□□□□□ -1.1
CLIP1P30622 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP1P30622 AC105254.2-201ENST00000603636 436 ntBASIC8.19□□□□□ -1.1
CLIP1P30622 EIF3FP1-201ENST00000613970 806 ntBASIC8.19□□□□□ -1.1
CLIP1P30622 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.19□□□□□ -1.1
CLIP1P30622 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.18□□□□□ -1.1
CLIP1P30622 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CLIP1P30622 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 SNORA77-201ENST00000408716 125 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 GPS2P1-201ENST00000411761 986 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP1P30622 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP1P30622 RPL31P44-201ENST00000447680 377 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 AC005412.2-201ENST00000492004 341 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP1P30622 COX6B1P5-201ENST00000509843 249 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP1P30622 AC092709.1-201ENST00000521355 1045 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC8.18□□□□□ -1.1
CLIP1P30622 AC005000.1-201ENST00000536192 288 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.18□□□□□ -1.1
CLIP1P30622 MTCYBP13-201ENST00000578634 1093 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 AC007996.1-201ENST00000620414 2821 ntBASIC8.18□□□□□ -1.1
CLIP1P30622 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLIP1P30622 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.17□□□□□ -1.1
CLIP1P30622 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
CLIP1P30622 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 HSPA8P14-201ENST00000552265 1805 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.17□□□□□ -1.1
CLIP1P30622 SNORA48.4-201ENST00000391089 134 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms