Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 IFIT1P1-201ENST00000400497 1449 ntBASIC5.74□□□□□ -1.49
CD40P25942 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 AC119674.1-204ENST00000641348 1343 ntBASIC5.74□□□□□ -1.49
CD40P25942 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.73□□□□□ -1.49
CD40P25942 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 RNU6-619P-201ENST00000365146 108 ntBASIC5.73□□□□□ -1.49
CD40P25942 MRPS6P2-201ENST00000381143 370 ntBASIC5.73□□□□□ -1.49
CD40P25942 RNU6-317P-201ENST00000384031 107 ntBASIC5.73□□□□□ -1.49
CD40P25942 AL161909.1-201ENST00000397390 712 ntBASIC5.73□□□□□ -1.49
CD40P25942 MIR541-201ENST00000401360 84 ntBASIC5.73□□□□□ -1.49
CD40P25942 AL049697.3-201ENST00000406493 982 ntBASIC5.73□□□□□ -1.49
CD40P25942 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 RN7SKP129-201ENST00000410288 299 ntBASIC5.73□□□□□ -1.49
CD40P25942 CEACAMP8-201ENST00000413902 580 ntBASIC5.73□□□□□ -1.49
CD40P25942 THEM7P-201ENST00000419556 672 ntBASIC5.73□□□□□ -1.49
CD40P25942 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.73□□□□□ -1.49
CD40P25942 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.73□□□□□ -1.49
CD40P25942 IFNNP1-201ENST00000429219 553 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC244035.1-201ENST00000430042 390 ntBASIC5.73□□□□□ -1.49
CD40P25942 PPIAP17-201ENST00000438507 471 ntBASIC5.73□□□□□ -1.49
CD40P25942 NPM1P33-201ENST00000438918 872 ntBASIC5.73□□□□□ -1.49
CD40P25942 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 AL161722.1-201ENST00000446972 1032 ntBASIC5.73□□□□□ -1.49
CD40P25942 TPMTP4-201ENST00000450749 678 ntBASIC5.73□□□□□ -1.49
CD40P25942 SULT1D1P-201ENST00000458020 882 ntBASIC5.73□□□□□ -1.49
CD40P25942 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 RN7SL834P-201ENST00000461450 286 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.73□□□□□ -1.49
CD40P25942 RN7SL568P-201ENST00000493069 298 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 AC008885.2-201ENST00000509506 930 ntBASIC5.73□□□□□ -1.49
CD40P25942 MTND3P5-201ENST00000512798 333 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.73□□□□□ -1.49
CD40P25942 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 GTF2IP8-201ENST00000560687 584 ntBASIC5.73□□□□□ -1.49
CD40P25942 MT1CP-201ENST00000567054 174 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.73□□□□□ -1.49
CD40P25942 SYPL1P2-201ENST00000582878 727 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 AL589743.6-201ENST00000611025 117 ntBASIC5.73□□□□□ -1.49
CD40P25942 SNX18P10-201ENST00000625014 519 ntBASIC5.73□□□□□ -1.49
CD40P25942 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CD40P25942 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CD40P25942 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.73□□□□□ -1.49
CD40P25942 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.73□□□□□ -1.49
CD40P25942 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD40P25942 AC007993.1-201ENST00000621298 2430 ntBASIC5.73□□□□□ -1.49
CD40P25942 AC046144.1-201ENST00000478559 1853 ntBASIC5.73□□□□□ -1.49
CD40P25942 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.72□□□□□ -1.49
CD40P25942 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CD40P25942 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CD40P25942 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CD40P25942 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CD40P25942 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.72□□□□□ -1.49
CD40P25942 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CD40P25942 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CD40P25942 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms