Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 E2F6P1-201ENST00000428850 745 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL353706.1-201ENST00000436728 494 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 E2F6P3-201ENST00000441743 743 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 REG1CP-206ENST00000447469 496 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 MTND1P27-201ENST00000451117 902 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL035407.2-201ENST00000454090 378 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 VPS25P1-201ENST00000455691 508 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 CDC42P1-201ENST00000456658 548 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 TREML3P-201ENST00000457327 501 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 BZW1P2-201ENST00000473537 826 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC005017.1-201ENST00000482002 490 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 CR383656.1-201ENST00000484916 377 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 MRPL57P6-201ENST00000506570 309 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC010343.2-201ENST00000510162 224 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 OR5H4P-201ENST00000510851 923 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC140134.1-201ENST00000511830 3544 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 HIGD1AP18-201ENST00000520730 278 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 AC005519.1-201ENST00000554490 601 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 MIR378H-201ENST00000579966 83 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC022069.1-201ENST00000582910 658 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.29□□□□□ -1.4
COL6A2P12110 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.29□□□□□ -1.4
COL6A2P12110 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.29□□□□□ -1.4
COL6A2P12110 AC122133.1-201ENST00000613964 233 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 Z69908.1-201ENST00000622603 247 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL157770.1-201ENST00000623049 439 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.29□□□□□ -1.4
COL6A2P12110 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL6A2P12110 SMG1P5-202ENST00000529428 4219 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 SMG1P2-201ENST00000566127 4221 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.29□□□□□ -1.4
COL6A2P12110 WDR95P-201ENST00000425638 1542 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 MTND4P26-201ENST00000415971 1359 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL6A2P12110 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL6A2P12110 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 SGO1P2-201ENST00000429458 1589 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL6A2P12110 NACA3P-201ENST00000359690 648 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 MIR433-201ENST00000384837 93 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 AC026310.1-201ENST00000396004 378 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 ZNF37CP-201ENST00000406795 241 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 RN7SKP151-201ENST00000410230 316 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 RN7SKP166-201ENST00000410812 305 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC027644.1-201ENST00000419595 298 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AL589794.1-201ENST00000424971 390 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 FO393419.3-201ENST00000428741 282 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 GTF2IP14-201ENST00000441415 586 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC010240.2-201ENST00000445363 1205 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AL020997.1-201ENST00000446554 349 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.28□□□□□ -1.4
COL6A2P12110 SLAMF6P1-201ENST00000451067 602 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.28□□□□□ -1.4
COL6A2P12110 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 RBMY2EP-202ENST00000456360 940 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AKR1D1P1-201ENST00000457236 936 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 RN7SKP198-201ENST00000459286 306 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 RNU7-140P-201ENST00000459546 60 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 SLC25A51P1-201ENST00000468432 871 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.28□□□□□ -1.4
COL6A2P12110 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 MTND5P13-201ENST00000513046 1079 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 RFPL4AP3-201ENST00000515267 345 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 RNA5SP400-201ENST00000517155 111 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 SEPT10P1-201ENST00000517342 1162 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC008429.4-201ENST00000521201 182 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 377.6 ms