Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.83□□□□□ -1.48
COL11A1P12107 TXNP5-201ENST00000441043 315 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.83□□□□□ -1.48
COL11A1P12107 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC093267.1-201ENST00000489176 961 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.83□□□□□ -1.48
COL11A1P12107 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC007786.3-201ENST00000615154 596 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 AC000095.2-202ENST00000637415 154 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL11A1P12107 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL11A1P12107 AP000547.3-204ENST00000588548 2523 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.82□□□□□ -1.48
COL11A1P12107 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL11A1P12107 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL11A1P12107 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL11A1P12107 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.82□□□□□ -1.48
COL11A1P12107 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL11A1P12107 RN7SKP113-201ENST00000363891 295 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 AC114755.2-201ENST00000413520 361 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 MRPS21P2-201ENST00000424704 264 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 AC010733.1-201ENST00000451515 401 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.82□□□□□ -1.48
COL11A1P12107 AC063943.1-201ENST00000465434 453 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 MRPS33P2-201ENST00000507850 322 ntBASIC5.82□□□□□ -1.48
COL11A1P12107 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL11A1P12107 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.82□□□□□ -1.48
COL11A1P12107 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL11A1P12107 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL11A1P12107 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL11A1P12107 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.82□□□□□ -1.48
COL11A1P12107 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL11A1P12107 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.82□□□□□ -1.48
COL11A1P12107 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL11A1P12107 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
COL11A1P12107 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL11A1P12107 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.81□□□□□ -1.48
COL11A1P12107 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 OR2AM1P-201ENST00000422137 422 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC245028.1-201ENST00000423259 256 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 RPL23AP56-201ENST00000460778 453 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 RN7SL441P-201ENST00000492388 296 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 EDDM3DP-201ENST00000554692 434 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL11A1P12107 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
COL11A1P12107 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 ZNF652P1-201ENST00000442420 1309 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 U3.30-201ENST00000391308 210 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 AC069213.2-201ENST00000420238 366 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL11A1P12107 HSPD1P12-201ENST00000429127 1069 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 USP9YP9-201ENST00000429406 715 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC016712.1-201ENST00000431088 378 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 AC090804.1-201ENST00000448870 490 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 RPL5P22-201ENST00000480199 884 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 RPS12P31-201ENST00000491419 398 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.81□□□□□ -1.48
COL11A1P12107 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.81□□□□□ -1.48
COL11A1P12107 RN7SKP260-201ENST00000516907 149 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 AC074050.1-201ENST00000563247 211 ntBASIC5.81□□□□□ -1.48
COL11A1P12107 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms