Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 GAPDHP48-201ENST00000436626 961 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 OR52Y1P-201ENST00000452418 828 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DQA1P01909 YRDCP3-201ENST00000456507 480 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AL445433.1-201ENST00000457507 257 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 GYG1P1-201ENST00000460864 698 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC093827.1-201ENST00000480094 861 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AC090686.1-201ENST00000481577 749 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AC091544.1-201ENST00000484702 348 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 Vault.2-201ENST00000516519 98 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AC027308.1-201ENST00000517993 110 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 OR11H3P-201ENST00000554547 982 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AL845552.1-201ENST00000556820 323 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AC092332.1-201ENST00000563684 829 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 VN1R81P-201ENST00000602085 372 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 NF1P10-201ENST00000613227 742 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 MIR7109-201ENST00000613748 65 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC135068.5-201ENST00000624197 983 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC063976.2-201ENST00000425667 3556 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DQA1P01909 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 UGT2B26P-201ENST00000508672 1613 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 SOCS5P3-201ENST00000425115 1576 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC007068.1-201ENST00000396690 844 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 HIST1H3PS1-201ENST00000404612 417 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL356968.2-201ENST00000412769 1257 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC013429.2-201ENST00000418798 781 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 ATP5LP2-201ENST00000440646 311 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 RN7SL269P-201ENST00000467795 305 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 RN7SL814P-201ENST00000487715 300 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL133372.1-201ENST00000493565 745 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL117692.1-201ENST00000494283 713 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 SNORD116-30-201ENST00000516468 85 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 RN7SKP35-201ENST00000517210 151 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC009879.1-201ENST00000520029 839 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 RNF138P2-201ENST00000603490 592 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL451049.1-201ENST00000608672 497 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC092266.1-201ENST00000610958 165 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AL122125.1-201ENST00000616999 600 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AP005431.1-201ENST00000618479 319 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC245014.3-201ENST00000618589 347 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms