Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RNA5SP132-201ENST00000364725 118 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LMX1BO60663 AC005042.1-201ENST00000393397 800 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 MRPL53P1-201ENST00000414323 319 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.96□□□□□ -1.62
LMX1BO60663 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.96□□□□□ -1.62
LMX1BO60663 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 AC017019.1-201ENST00000426129 261 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AC011242.1-201ENST00000433596 1158 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AL627308.1-201ENST00000435693 821 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AL590399.4-201ENST00000436561 601 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AC002504.1-201ENST00000438281 691 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.96□□□□□ -1.62
LMX1BO60663 HMGN1P5-201ENST00000448591 263 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 OR52Y1P-201ENST00000452418 828 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 PPP1R11P1-201ENST00000486095 376 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.96□□□□□ -1.62
LMX1BO60663 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LMX1BO60663 RN7SL466P-201ENST00000497546 295 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 AC113192.3-201ENST00000529152 742 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 AC068339.2-201ENST00000534395 618 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.96□□□□□ -1.62
LMX1BO60663 AL356801.1-201ENST00000559320 294 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AC096996.1-201ENST00000563813 325 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 FAM60CP-201ENST00000591086 664 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 BNIP3P38-201ENST00000601117 544 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 FO393422.1-201ENST00000603908 708 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AC104695.2-201ENST00000605056 775 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AL158050.2-201ENST00000605336 568 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LMX1BO60663 MIR6719-201ENST00000622428 87 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AC005618.4-201ENST00000625053 554 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AL445984.1-201ENST00000637834 659 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 AC119674.1-220ENST00000641502 1048 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMX1BO60663 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.96□□□□□ -1.62
LMX1BO60663 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LMX1BO60663 THAP12P8-201ENST00000447914 2115 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMX1BO60663 AC117409.1-201ENST00000470499 1310 ntBASIC4.96□□□□□ -1.62
LMX1BO60663 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LMX1BO60663 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 RNA5SP500-201ENST00000364486 119 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 ADAM24P-201ENST00000398655 2101 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 AC016739.1-201ENST00000405359 345 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 VN1R21P-201ENST00000426703 765 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 TPTE2P3-201ENST00000441562 1189 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 MEMO1P4-201ENST00000453590 386 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 RN7SL610P-201ENST00000463845 291 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.95□□□□□ -1.62
LMX1BO60663 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 MTND1P24-201ENST00000552175 861 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 NPM1P5-201ENST00000557228 838 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms