Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 U6.112-201ENST00000384129 70 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 LIPT1P1-201ENST00000415870 1186 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 OR5M12P-201ENST00000423388 929 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL731534.1-201ENST00000434711 269 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL7P29-201ENST00000437151 728 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC005077.1-201ENST00000449226 375 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL7P61-201ENST00000451721 751 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 EIF1P7-201ENST00000487533 337 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 RPS27AP16-201ENST00000492222 470 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC093890.1-201ENST00000502554 540 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC108471.1-201ENST00000513977 287 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 OR5H7P-201ENST00000514084 930 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC060775.1-201ENST00000518241 520 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 TRIM51DP-201ENST00000529746 596 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 ATP5F1P7-201ENST00000567330 760 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 RN7SL622P-201ENST00000585292 275 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC090236.2-201ENST00000587933 1101 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC119403.2-201ENST00000590960 598 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL606834.3-201ENST00000602615 496 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC108673.3-201ENST00000609183 335 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AL050303.3-201ENST00000613704 284 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC096708.4-201ENST00000620563 552 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC138907.10-201ENST00000623708 983 ntBASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 RNA5SP477-201ENST00000362639 119 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AL035419.1-201ENST00000397037 564 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 HMGB3P18-201ENST00000406327 590 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 RN7SKP166-201ENST00000410812 305 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC016027.4-201ENST00000450866 277 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AL358876.1-201ENST00000453364 1075 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 HLA-DPA3-207ENST00000454398 229 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 DUXAP8-207ENST00000456786 622 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC104164.3-201ENST00000467363 1258 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC124945.1-201ENST00000485133 188 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC108729.1-201ENST00000487812 947 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC110760.3-202ENST00000515177 371 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 RN7SKP67-201ENST00000515905 235 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms