Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF619P1-201ENST00000446539 752 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 RPL7L1P3-201ENST00000455249 689 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC092865.4-201ENST00000477936 615 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC106872.4-201ENST00000510050 523 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 RPS27AP18-201ENST00000515536 459 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC244502.2-201ENST00000543361 851 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC084759.1-201ENST00000561168 290 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC125494.2-201ENST00000602431 657 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC096947.1-201ENST00000603233 470 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AP002906.1-201ENST00000603405 233 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC090525.3-201ENST00000605601 189 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC096708.4-201ENST00000620563 552 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC129915.3-201ENST00000634128 948 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRFN1Q9P244 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRFN1Q9P244 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 AC092724.1-201ENST00000624623 3397 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRFN1Q9P244 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRFN1Q9P244 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 GTF2IP4-201ENST00000453092 2054 ntBASIC5.62□□□□□ -1.51
LRFN1Q9P244 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.62□□□□□ -1.51
LRFN1Q9P244 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC079753.1-201ENST00000623243 3868 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LYPLA1P3-201ENST00000402650 695 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AL096829.1-201ENST00000413677 457 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 SLC20A1P1-201ENST00000413906 956 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC01881-201ENST00000416103 412 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 DPPA2P2-201ENST00000418220 897 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 REREP1Y-201ENST00000422655 198 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 FTH1P16-201ENST00000435241 552 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AL451136.1-201ENST00000435399 325 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 REREP2Y-201ENST00000439103 200 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC000041.1-201ENST00000439655 175 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AL359091.1-201ENST00000449048 1734 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 Z95152.1-201ENST00000453556 656 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 HMGB1P4-201ENST00000455362 567 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 RPL7P45-201ENST00000455851 743 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 EIF1P7-201ENST00000487533 337 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 RN7SL101P-201ENST00000496350 279 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 PSG10P-201ENST00000501199 1500 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC026414.1-201ENST00000504046 698 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 DDX18P4-201ENST00000511690 1966 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC111000.6-201ENST00000514471 709 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 RNA5SP271-201ENST00000516700 88 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC118942.1-201ENST00000529674 1035 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AP002812.4-201ENST00000532139 286 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC011611.5-201ENST00000552477 578 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 NPM1P47-201ENST00000560843 856 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms