Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 AC022325.1-201ENST00000502748 2199 ntBASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 OR10AB1P-202ENST00000641219 1686 ntBASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 ELL2P3-201ENST00000457883 1602 ntBASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 AC024651.2-201ENST00000562480 2098 ntBASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.86□□□□□ -1.31
PDLIM7Q9NR12 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL591848.4-201ENST00000567832 3472 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 SNORA74A-201ENST00000364089 198 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 RNU6-796P-201ENST00000391086 107 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC022028.1-201ENST00000412054 408 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL008987.1-201ENST00000415528 237 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 NPM1P22-201ENST00000427761 952 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL606490.7-201ENST00000433136 191 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL353706.1-201ENST00000436728 494 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 MTND1P1-201ENST00000445453 368 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC092691.2-201ENST00000461787 803 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 RNA5SP34-201ENST00000516887 130 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AP005639.1-201ENST00000526939 192 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AP000916.1-201ENST00000533869 835 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 MTCO3P22-201ENST00000603219 784 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC080078.2-201ENST00000603766 501 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC022079.2-201ENST00000619739 566 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 OR8G3P-202ENST00000641572 1255 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC011504.1-201ENST00000623331 4103 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 OR52B5P-204ENST00000641744 3467 ntBASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDLIM7Q9NR12 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 NEPNP-201ENST00000404786 1371 ntBASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 AC011369.2-201ENST00000624423 1567 ntBASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDLIM7Q9NR12 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms