Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 NDUFA5P11-201ENST00000567995 343 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC005726.4-201ENST00000582858 458 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 RN7SL435P-201ENST00000584418 282 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 MIR6778-201ENST00000617912 73 ntBASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCNB1IP1Q9NPC3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC079298.1-201ENST00000625026 1619 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AL159987.1-201ENST00000347911 293 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 RNU1-19P-201ENST00000363306 165 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 RAB5CP1-201ENST00000395972 580 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AL009179.1-201ENST00000406085 265 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 NANOGP4-201ENST00000427230 913 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 GAPDHP48-201ENST00000436626 961 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC016687.1-201ENST00000482574 353 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC073610.1-201ENST00000489971 396 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC109481.1-201ENST00000509173 282 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 IGBP1P1-201ENST00000554337 1009 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC015802.2-201ENST00000589690 189 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC006272.2-201ENST00000594725 163 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AL359742.1-201ENST00000622497 540 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AP000648.2-201ENST00000624182 404 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 MIPEPP2-201ENST00000422560 1819 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 AC003973.3-201ENST00000624863 2822 ntBASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNB1IP1Q9NPC3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 PCAT14-202ENST00000627127 3935 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 GAPDHP24-201ENST00000328713 983 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 OR2AT2P-201ENST00000413438 905 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 RPS3P2-201ENST00000421346 701 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 KCTD9P1-201ENST00000430462 1167 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 AL450023.1-201ENST00000450868 751 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 AL445665.1-202ENST00000452436 324 ntBASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNB1IP1Q9NPC3 RPS17P15-201ENST00000475609 349 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms