Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 RNU6-167P-201ENST00000384292 106 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 RNA5SP187-201ENST00000384400 119 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 EI24P3-201ENST00000399046 1062 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AL390774.1-201ENST00000411924 246 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 OR6D1P-201ENST00000436165 939 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 OTX2P1-201ENST00000450956 354 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 RN7SL222P-201ENST00000476452 299 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AL121594.2-201ENST00000541658 472 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC126177.5-201ENST00000549599 178 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC234775.3-201ENST00000564612 656 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC027216.1-201ENST00000577726 685 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC010503.3-201ENST00000594355 540 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AL445222.1-201ENST00000607259 628 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AL121612.2-201ENST00000612261 482 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC107021.2-201ENST00000567714 2095 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 PWAR1-201ENST00000624188 2414 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RN7SKP6-201ENST00000364795 319 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RNU6-1263P-201ENST00000384601 106 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RN7SKP279-201ENST00000411383 298 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AL133325.1-201ENST00000421090 382 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 CRIP1P1-201ENST00000427567 185 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC138761.5-201ENST00000433967 325 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 OR52B5P-201ENST00000435337 951 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RPL12P18-201ENST00000437175 325 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AL138787.1-202ENST00000437804 898 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC245047.2-201ENST00000441060 530 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 FAR2P1-206ENST00000449736 709 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC004453.1-201ENST00000487895 408 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RPS23P1-201ENST00000491662 432 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RN7SL808P-201ENST00000496066 299 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC147055.3-201ENST00000510547 851 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 OR4A46P-201ENST00000527255 933 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC084824.2-201ENST00000548906 345 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AGGF1P7-201ENST00000562369 913 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AL513327.3-201ENST00000602618 469 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 AC015712.7-201ENST00000615211 635 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 OR52B5P-202ENST00000641118 1110 ntBASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF3Q9HD45 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms