Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 BX284613.1-201ENST00000452221 1641 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RN7SKP95-201ENST00000362860 303 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC090018.1-201ENST00000434369 367 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC090804.1-201ENST00000448870 490 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RN7SL610P-201ENST00000463845 291 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC231760.1-201ENST00000498002 260 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC095055.1-201ENST00000603472 1113 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 WBP1LP8-201ENST00000617401 327 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC063952.1-203ENST00000634410 658 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AL031123.3-201ENST00000623345 1837 ntBASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KIAA1549Q9HCM3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 MIR765-201ENST00000390226 114 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 PSAT1P4-201ENST00000466500 526 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AC097484.1-201ENST00000471148 389 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AC116651.1-201ENST00000609724 556 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 CR381572.2-201ENST00000624852 397 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AC104581.5-201ENST00000624171 7141 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 RNU4-2-201ENST00000365668 141 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 DDX39BP1-205ENST00000422507 192 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AL590399.4-201ENST00000436561 601 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 CEACAMP7-201ENST00000444105 496 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 HIGD1AP8-201ENST00000453927 274 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AP002373.2-201ENST00000541631 1060 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 PRPF19P1-201ENST00000584766 898 ntBASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KIAA1549Q9HCM3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 COX6B1P2-201ENST00000489624 230 ntBASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AC105420.1-201ENST00000504389 582 ntBASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms