Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC093775.1-201ENST00000624154 1868 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 RNA5SP273-201ENST00000362484 113 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 RNA5SP477-201ENST00000362639 119 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 RNU6-666P-201ENST00000363499 107 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 RNU2-17P-201ENST00000410290 190 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 MRPL53P1-201ENST00000414323 319 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 BX276092.6-201ENST00000430476 250 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC069154.1-201ENST00000432914 542 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 CYCSP11-201ENST00000436426 315 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 BX276092.8-201ENST00000455722 250 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 Z83838.1-202ENST00000456225 839 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC096741.1-201ENST00000472250 846 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 ATP5LP5-201ENST00000483050 299 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 DUTP1-201ENST00000493631 470 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 MTCO2P9-201ENST00000503214 694 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC025458.1-201ENST00000506046 166 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 HMGN1P15-201ENST00000513870 295 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 RNA5SP438-201ENST00000516561 112 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AGGF1P7-201ENST00000562369 913 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 DHFRP1-201ENST00000579682 559 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 DNAJC19P3-201ENST00000594491 331 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 FAM27E4-201ENST00000605259 342 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 MIR7109-201ENST00000613748 65 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 FRG1DP-201ENST00000635586 771 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AC011933.2-201ENST00000578539 2790 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF2Q9HAW0 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 AL136520.1-201ENST00000600311 1322 ntBASIC5.48□□□□□ -1.53
BRF2Q9HAW0 BCORP1-203ENST00000513194 5093 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AL121886.1-201ENST00000358609 435 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 RNU1-150P-201ENST00000362491 162 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 OR51A6P-201ENST00000418680 1004 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC099670.2-201ENST00000435130 321 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 RPS23P9-201ENST00000448848 438 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 YRDCP3-201ENST00000456507 480 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 RPS17P5-201ENST00000498293 408 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 IMPA1P1-201ENST00000510718 842 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms