Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 RN7SL352P-201ENST00000466002 277 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 RPL6P9-201ENST00000466502 859 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC021006.1-201ENST00000489849 553 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 GM2AP2-201ENST00000491764 562 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC026414.1-201ENST00000504046 698 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 SCARNA21.2-201ENST00000516600 166 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LRRC6P1-201ENST00000532188 885 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC005224.3-201ENST00000584683 2140 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 CCDC58P3-201ENST00000590792 430 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC012368.3-201ENST00000604190 219 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 RNA5SP439-201ENST00000617595 124 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC090897.3-201ENST00000636973 1157 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC010325.3-201ENST00000641084 394 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 OR8G3P-202ENST00000641572 1255 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 BX649567.1-201ENST00000642071 1134 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC018717.1-201ENST00000457712 1505 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC004076.2-201ENST00000620532 3323 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC083837.1-201ENST00000565297 2994 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RNA5SP453-201ENST00000362503 119 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RNA5SP485-201ENST00000365053 119 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RNU6-31P-201ENST00000384388 108 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 UBE2V1P11-201ENST00000411559 285 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC017078.1-201ENST00000416146 368 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 EMC3-AS1-205ENST00000438698 534 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 COX4I1P2-201ENST00000447446 547 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AL096803.2-201ENST00000450032 677 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RN7SL39P-201ENST00000462264 297 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 SNRPCP3-201ENST00000474888 476 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RPS4XP6-201ENST00000477670 797 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AP002884.1-201ENST00000479691 655 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RPS12P31-201ENST00000491419 398 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC138409.2-202ENST00000507274 458 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 OR4D12P-201ENST00000509361 911 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 snoU109.5-201ENST00000516231 132 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 Y_RNA.688-201ENST00000516565 95 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 MRPS36P3-201ENST00000519284 130 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC084121.1-201ENST00000533882 835 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AL049830.4-201ENST00000555149 351 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 MTCO2P22-201ENST00000603246 681 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC069304.3-201ENST00000603938 1084 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC107952.2-201ENST00000606048 486 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC080013.6-201ENST00000606185 215 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC022106.1-201ENST00000612834 766 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 RN7SL261P-201ENST00000613441 282 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 MIR4302-201ENST00000638058 60 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms