Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC005294.1-201ENST00000355509 281 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC124944.2-201ENST00000429866 1242 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC016712.1-201ENST00000431088 378 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 RPL5P12-201ENST00000477071 851 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC083982.1-201ENST00000485679 344 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AP003080.1-202ENST00000526526 915 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC127381.1-201ENST00000555979 939 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AL031658.2-201ENST00000616850 651 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 HSPA8P18-201ENST00000439846 1928 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 AC005831.1-201ENST00000624384 1697 ntBASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 MIR105-1-201ENST00000385222 81 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 HSPD1P12-201ENST00000429127 1069 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 RPL7L1P9-201ENST00000431298 745 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AL359265.1-201ENST00000440296 795 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC008897.1-201ENST00000494006 347 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 MTCYBP13-201ENST00000578634 1093 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 SUGT1P3-202ENST00000604259 383 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 RN7SL385P-201ENST00000468873 276 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC090638.1-201ENST00000498296 909 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC092709.1-201ENST00000521355 1045 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC009027.1-201ENST00000604510 479 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AC008115.3-201ENST00000614874 549 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AL162574.1-201ENST00000615702 950 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 AP000346.3-201ENST00000622821 210 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 LINC01739-205ENST00000641890 573 ntBASIC5.42□□□□□ -1.54
SHROOM3Q8TF72 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 AC090804.1-201ENST00000448870 490 ntBASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 RN7SL371P-201ENST00000578099 267 ntBASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 PRPF19P1-201ENST00000584766 898 ntBASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 AC060766.1-201ENST00000590824 627 ntBASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms