Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 SNORA79B-201ENST00000410557 148 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 SRSF1P1-201ENST00000424058 520 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 RPL7AP49-201ENST00000429522 581 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AL591438.1-201ENST00000433508 581 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 RPL36AP39-201ENST00000445859 318 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AL591623.2-201ENST00000449978 222 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC002553.2-201ENST00000453217 340 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 USP9YP2-201ENST00000504503 1000 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 USP9YP1-201ENST00000513521 1002 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 CDC42P3-201ENST00000518493 633 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC068993.1-201ENST00000546724 589 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 LSM3P2-201ENST00000551246 273 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 RNA5SP440-201ENST00000612665 119 ntBASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ZNF439Q8NDP4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 RNA5SP241-201ENST00000391326 114 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 MIR1282-201ENST00000408865 101 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 CDY17P-201ENST00000414121 1282 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 HYALP1-201ENST00000417674 1279 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 HSPD1P12-201ENST00000429127 1069 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 RPS29P14-201ENST00000431518 171 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AL138899.2-201ENST00000439139 499 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 TCEA1P3-201ENST00000443005 880 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AP000281.1-201ENST00000444036 316 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC073909.1-201ENST00000447112 999 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 RPS27AP2-201ENST00000457576 465 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC092754.1-201ENST00000472975 479 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 HMGB1P44-201ENST00000508597 572 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC078878.1-201ENST00000539832 958 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC015720.2-201ENST00000567709 334 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 RN7SL290P-201ENST00000578661 300 ntBASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF439Q8NDP4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms