Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VPS8Q8N3P4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS8Q8N3P4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
VPS8Q8N3P4 RNA5SP87-201ENST00000384155 118 ntBASIC8□□□□□ -1.13
VPS8Q8N3P4 CEACAMP7-201ENST00000444105 496 ntBASIC8□□□□□ -1.13
VPS8Q8N3P4 TCEA1P1-201ENST00000449716 880 ntBASIC8□□□□□ -1.13
VPS8Q8N3P4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8□□□□□ -1.13
VPS8Q8N3P4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC8□□□□□ -1.13
VPS8Q8N3P4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8□□□□□ -1.13
VPS8Q8N3P4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8□□□□□ -1.13
VPS8Q8N3P4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8□□□□□ -1.13
VPS8Q8N3P4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8□□□□□ -1.13
VPS8Q8N3P4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8□□□□□ -1.13
VPS8Q8N3P4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8□□□□□ -1.13
VPS8Q8N3P4 AC019322.1-201ENST00000571869 389 ntBASIC8□□□□□ -1.13
VPS8Q8N3P4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS8Q8N3P4 AL591135.1-201ENST00000401578 5914 ntBASIC8□□□□□ -1.13
VPS8Q8N3P4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8□□□□□ -1.13
VPS8Q8N3P4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
VPS8Q8N3P4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VPS8Q8N3P4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS8Q8N3P4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8□□□□□ -1.13
VPS8Q8N3P4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 SNORA66-201ENST00000384792 133 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AC068138.1-201ENST00000412635 217 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 HYALP1-201ENST00000417674 1279 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AC093162.1-201ENST00000419682 124 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 RPL35AP28-201ENST00000459730 331 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 RN7SKP66-201ENST00000516681 231 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AP002884.5-201ENST00000595053 1132 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AC087783.2-201ENST00000605070 562 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 AL445528.2-201ENST00000620582 470 ntBASIC7.99□□□□□ -1.13
VPS8Q8N3P4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS8Q8N3P4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 MIPEPP2-201ENST00000422560 1819 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 RNA5SP123-201ENST00000363244 119 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AC009963.4-201ENST00000448535 339 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 RN7SL97P-201ENST00000486780 299 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 MRPS33P2-201ENST00000507850 322 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 RNA5SP392-201ENST00000516905 112 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AP001922.4-201ENST00000526967 290 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 MIR4646-201ENST00000580775 63 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AP001153.1-201ENST00000641024 338 ntBASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS8Q8N3P4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 RPL5P2-201ENST00000429598 854 ntBASIC7.97□□□□□ -1.13
VPS8Q8N3P4 PA2G4P6-201ENST00000438325 1197 ntBASIC7.97□□□□□ -1.13
VPS8Q8N3P4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 OR52E3P-201ENST00000452083 936 ntBASIC7.97□□□□□ -1.13
VPS8Q8N3P4 AC012339.2-201ENST00000523996 453 ntBASIC7.97□□□□□ -1.13
VPS8Q8N3P4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 AC073575.2-201ENST00000614212 627 ntBASIC7.97□□□□□ -1.13
VPS8Q8N3P4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS8Q8N3P4 AC140134.1-201ENST00000511830 3544 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms