Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC104964.3-201ENST00000606115 2860 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC010266.2-201ENST00000564741 3255 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC093849.1-201ENST00000563631 2209 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 PTGES3P2-201ENST00000407942 482 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RPS4XP16-201ENST00000427198 791 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 DEFA9P-201ENST00000433042 285 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC242426.1-201ENST00000435270 960 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC023194.2-201ENST00000465398 406 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 MTCO2P9-201ENST00000503214 694 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC105384.2-201ENST00000508433 640 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RN7SKP183-201ENST00000517169 324 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 WBP1LP3-201ENST00000523033 208 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 IGLV3-30-201ENST00000524362 298 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AP003396.4-201ENST00000527574 265 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC084121.1-201ENST00000533882 835 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 NANOGNBP2-201ENST00000544753 553 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RPA2P1-201ENST00000556557 721 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC018618.2-201ENST00000604770 446 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC108673.3-201ENST00000609183 335 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC245014.3-201ENST00000618589 347 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 MIR6806-201ENST00000622141 64 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AL683826.1-201ENST00000624104 627 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CASC19-274ENST00000642018 970 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 MTCO1P4-201ENST00000520516 1409 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 AC104966.1-201ENST00000467010 1464 ntBASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00346Q8IVM7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 COX6B1P3-201ENST00000312310 260 ntBASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00346Q8IVM7 RNU6-304P-201ENST00000364855 107 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms