Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 TAF9BP2-201ENST00000400856 499 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL133482.1-201ENST00000415988 498 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 BX119904.1-201ENST00000432026 348 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL353662.1-201ENST00000439099 327 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 RPS19P6-201ENST00000441327 433 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC092691.2-201ENST00000461787 803 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 LARP7P4-201ENST00000481075 878 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 RPS7P6-201ENST00000485777 579 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 GTF2IP9-201ENST00000502460 301 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 MRPS5P3-201ENST00000515577 166 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC137627.1-201ENST00000545761 289 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL512310.9-201ENST00000553311 948 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL121594.4-201ENST00000556211 1196 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 CCDC58P1-201ENST00000578567 430 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC023762.1-201ENST00000603280 584 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC079880.2-201ENST00000603790 1213 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AL136131.3-201ENST00000607600 188 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AP001033.2-201ENST00000609701 1003 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC007275.1-201ENST00000621243 671 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AP003476.1-201ENST00000623984 516 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC099654.9-201ENST00000637055 678 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 AC132825.1-201ENST00000463573 2247 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHFQ7M4L6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 QRSL1P1-201ENST00000400977 1540 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 YWHAZP6-201ENST00000399764 738 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC017078.1-201ENST00000416146 368 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 NENFP1-201ENST00000419476 466 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 OR10T1P-201ENST00000424327 947 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 RPSAP32-201ENST00000432681 526 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 MTCYBP21-201ENST00000443300 1113 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 RPL5P7-201ENST00000444235 813 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC092106.1-201ENST00000444291 373 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC097463.1-201ENST00000447288 481 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 KF459542.1-201ENST00000450908 553 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 GUSBP9-201ENST00000510138 584 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 GAPDHP71-201ENST00000511530 1003 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AP001000.1-201ENST00000526843 742 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 YWHAZP1-201ENST00000556286 722 ntBASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.14□□□□□ -1.59
SHFQ7M4L6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms