Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL136455.1-201ENST00000441083 1240 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC092647.3-201ENST00000443044 633 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 RPL35AP28-201ENST00000459730 331 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 RPL37AP8-201ENST00000494116 276 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC011840.5-201ENST00000582125 771 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.16□□□□□ -1.42
GABPAQ06546 AP005432.2-201ENST00000608162 586 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AC093799.2-201ENST00000610062 578 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 MIR6133-201ENST00000617057 108 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AC020763.5-201ENST00000623298 430 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC135068.12-201ENST00000637370 931 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
GABPAQ06546 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
GABPAQ06546 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.15□□□□□ -1.42
GABPAQ06546 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
GABPAQ06546 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.15□□□□□ -1.42
GABPAQ06546 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.15□□□□□ -1.42
GABPAQ06546 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
GABPAQ06546 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.15□□□□□ -1.42
GABPAQ06546 AC103591.2-201ENST00000265259 766 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
GABPAQ06546 DDX39BP1-205ENST00000422507 192 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 TAAR4P-201ENST00000454843 1039 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 RNU6-964P-201ENST00000516524 69 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 MIR4700-201ENST00000578311 74 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 MIR4436B2-201ENST00000581415 91 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 MIR4436B1-201ENST00000583272 91 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 AC063952.1-203ENST00000634410 658 ntBASIC6.15□□□□□ -1.42
GABPAQ06546 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
GABPAQ06546 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.15□□□□□ -1.43
GABPAQ06546 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.15□□□□□ -1.43
GABPAQ06546 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
GABPAQ06546 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
GABPAQ06546 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.15□□□□□ -1.43
GABPAQ06546 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
GABPAQ06546 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.15□□□□□ -1.43
GABPAQ06546 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
GABPAQ06546 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.14□□□□□ -1.43
GABPAQ06546 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
GABPAQ06546 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.14□□□□□ -1.43
GABPAQ06546 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 CHMP1B2P-201ENST00000399581 597 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.14□□□□□ -1.43
GABPAQ06546 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.14□□□□□ -1.43
GABPAQ06546 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.14□□□□□ -1.43
GABPAQ06546 AL359265.1-201ENST00000440296 795 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 HIGD1AP8-201ENST00000453927 274 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.14□□□□□ -1.43
GABPAQ06546 AC002075.1-201ENST00000457396 676 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AC093827.1-201ENST00000480094 861 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.14□□□□□ -1.43
GABPAQ06546 RPL7P41-201ENST00000485823 957 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.14□□□□□ -1.43
GABPAQ06546 RPS24P16-201ENST00000497294 392 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AC022360.1-201ENST00000521058 340 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AC130364.2-201ENST00000528639 604 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.14□□□□□ -1.43
GABPAQ06546 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.14□□□□□ -1.43
GABPAQ06546 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.14□□□□□ -1.43
GABPAQ06546 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.14□□□□□ -1.43
GABPAQ06546 MIR7853-201ENST00000584820 132 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AP002884.5-201ENST00000595053 1132 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.14□□□□□ -1.43
GABPAQ06546 AC011626.1-201ENST00000604710 562 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.14□□□□□ -1.43
GABPAQ06546 AC010632.3-201ENST00000611377 369 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 Mico1.1-201ENST00000611698 204 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 AL049539.1-201ENST00000611964 459 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
GABPAQ06546 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
GABPAQ06546 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 AC099654.3-201ENST00000447087 1546 ntBASIC6.14□□□□□ -1.43
GABPAQ06546 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GABPAQ06546 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GABPAQ06546 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GABPAQ06546 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms