Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 OR7E156P-201ENST00000400303 464 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 HMGB1P20-201ENST00000402555 677 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 RPL21P67-201ENST00000402896 478 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 VN1R12P-201ENST00000403778 876 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 RPS3AP2-201ENST00000407190 754 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 RPS23P6-201ENST00000466136 431 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 RN7SL583P-201ENST00000475692 287 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 RPS3AP15-201ENST00000483874 781 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC021106.1-201ENST00000509020 1058 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 RNU6-615P-201ENST00000516065 106 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AP001496.3-201ENST00000580230 913 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 MAPK10-349ENST00000641767 3661 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AC007996.1-201ENST00000620414 2821 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.14□□□□□ -1.75
HIST1H1AQ02539 TRIM51GP-201ENST00000534741 1350 ntBASIC4.14□□□□□ -1.75
HIST1H1AQ02539 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 PPIAP9-201ENST00000403866 498 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 OR2AT2P-201ENST00000413438 905 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 PCNPP4-201ENST00000414817 517 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 NANOGP4-201ENST00000427230 913 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AL389925.1-201ENST00000432257 728 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 RN7SL273P-201ENST00000481561 299 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 RPL37P23-201ENST00000492641 294 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC090638.1-201ENST00000498296 909 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 BTG4P1-201ENST00000510421 183 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 RNA5SP271-201ENST00000516700 88 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 CDC42P3-201ENST00000518493 633 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 MRPS16P1-201ENST00000523462 412 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 TRIM77BP-201ENST00000524985 1119 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 TOMM20P1-201ENST00000534518 427 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 IGBP1P1-201ENST00000554337 1009 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC124856.1-201ENST00000600819 896 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AL008729.2-201ENST00000606393 473 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms